Specificity

time saving

Toolkit

Specificity calculation

Results

specificity package

The specificity package is designed to calculate the specificity of barcode sequences against a set of species sequences. It provides tools for reading sequences from a file, calculating the average nucleotide specificity, and exporting the results to an Excel file.

1.Prepare the document for reference

2.Help document

Installation

pip install specificity

Importing the Package

from specificity import calculate_specificity

Use the recallrate package

# Set file paths

barcode_file_path = 'path/to/your/barcodes.txt'

species_folder_path = 'path/to/your/species_sequences'

output_excel_path = 'path/to/your/output.xlsx'

# Call the function to process files and generate an Excel report

process_files(barcode_file_path, species_folder_path, output_excel_path)

For more information, please refer to the GitHub issues page.